Sapidyne

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17th Newsletter
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16th Newsletter
16th Newsletter Highlights
  • Publication Spotlight: AlphaBind, a Domain-Specific Model to Predict & Optimize Antibody-Antigen Binding Affinity
  • The Future of Solid Phase: Transitioning from microplastics-based beads to glass beads
  • Solid Phase Selection Guide: What is right for your experiment?
15th Newsletter
15th Newsletter Highlights
  • User Spotlight: Dr. Palaiswami Rathaswami
  • Implementing a Cleaning Cycle: This article guides you through the process of cleaning cycles and helps you get the best data possible.
14th Newsletter
14th Newsletter Highlights
  • Publication Spotlight: Unleashing Natural IL18 Activity Using an Anti-IL18BP Blocker Induces Potent Immune Stimulation and Antitumor Effects
  • Reducing Non-Specific Binding
  • Answering FAQs
13th Newsletter
13th Newsletter Highlights
  • Publication Spotlight: Determining the affinities of high-affinity antibodies using KinExA and surface plasmon resonance
  • KinExA Mode Test: discover what it means to be in KinExA mode and why it is important
  • Video: KinExA Data Analysis with KinExA co-inventor Thomas R. Glass PhD
12th Newsletter
12th Newsletter Highlights
  • KinExA Seminar: Introduction of the speakers and brief analysis of the topics that were covered at our seminar in Boise
11th Newsletter
11th Newsletter Highlights
  • Temperature Measurements
  • Tips & Tricks: Aspiration Pump Syringe Purge
  • Ask the Inventor: Why do measurements need to be performed in the linear range? How will equilibrium & kinetic data be affected outside of linear range?
  • Geek Corner: The Autosampler Calibration Wizard
10th Newsletter
10th Newsletter Highlights
  • Cell Pellets & the Effect on Equilibrium
  • Introduction of the new LED Lamps
  • Ask the Inventor: What is the difference between avidity and cooperativity?
  • Geek Corner: 21 CFR Part 11 Compliance
9th Newsletter
9th Newsletter Highlights
  • Temperature effects on Kd Measurements
  • Contract KinExA Research
  • Publication Spotlight: Researchers at Regeneron describe how SPR capture surfaces can profoundly impact the binding kinetics that are measured for molecular interactions.
  • Ask the Inventor: In brief, what are the differences between KinExA & SPR?
  • Geek Corner: KinExA Pro software shortcuts
8th Newsletter
8th Newsletter Highlights
  • KinExA Concentration Measurements
  • Anti-His Secondary Antibody
  • Ask the Inventor: How is cell expression level determined with KinExA and how does it compare to soluble titrant activity?
  • Geek Corner: KinExA 4000 Signal Output
  • Tips & Tricks: Coating PMMA with Biotin
7th Newsletter
7th Newsletter Highlights
  • Expanding KinExA Capabilities: Whole Cell Measurements, Direct Off Rate Measurement, Competitive Binding Analysis, & Positive Cooperativity Analysis
  • Ask the Inventor: The dielectric grease for the flow cell is messy and interferes with my camera images, do I really have to use it?
  • Tips & Tricks: Bead Coating
  • Publication Spotlight: Three for the Price of One - KinExA is used to measure the affinity for a combination of 3 antibodies against botulinum neurotoxin (BoNT)
6th Newsletter
6th Newsletter Highlights
  • Including Measured NSB in your Analysis
  • Publication Spotlight: Measuring Sphingosine-1-Phosphate: Protein Interactions with the Kinetic Exclusion Assay
  • Tips & Tricks: Queue Cleaning Templates
  • Geek Corner: Exporting Charts
  • Ask the Inventor: Let's say I have a Kd controlled curve with an adequately resolved Kd. Why should I go to the trouble to perform a second experiment and use the n-curve analysis?
5th Newsletter
5th Newsletter Highlights
  • KinExA Analysis
  • Cooperativity
  • Tips & Tricks: Reusing Beads
  • Geek Corner: New Software Features
  • Ask the Inventor: How can I confirm my antibody is really cooperative?
4th Newsletter
4th Newsletter Highlights
  • KinExA Mode
  • Tips & Tricks: Reducing NSB (non-specific binding)
  • Geek Corner: New Software Features
  • Ask the Inventor: The only way I can increase my signal is to run very high volumes. The large samples make painfully long experiment run times, is there anything else I can do to optimize my signal?
3rd Newsletter
3rd Newsletter Highlights
  • The KinExA Theory Curve
  • Manual Kinetics Direct
  • Tips & Tricks: Capture Percentage and Experiments
  • Geek Corner: Theoretical Binding Curve Demonstration Software
  • Ask the Inventor: I saw an article in Analytical Biochemistry that says the KinExA analysis is wrong. Is it?
2nd Newsletter
2nd Newsletter Highlights
  • Whole Cell Measurements with KinExA
  • How low can we go? Analyzing the minimum sample volume for experiments, and the minimum dead volume required.
  • Tips & Tricks: Lamp Alignment and the Excitation Power Monitor (EPM)
  • Geek Corner: KinExA Experiment Backups
  • Ask the Inventor: What do the KinExA error graphs show and how should they be used?
1st Newsletter
1st Newsletter Highlights
  • Maintaining the KinExA Instrument
  • Publication Spotlight: Kinetic analysis of unpurified native antigens available in very low quantities and concentrations.
  • Tips & Tricks: Pressure Transducer
  • Geek Corner: Exporting and Saving Experiment Options
  • Ask the Inventor:

    Question 1: Sapidyne recommends performing my ligand serial dilution in receptor solution. To begin, I add concentrated ligand to the first sample then mix and do the serial dilution. Doesn't this mean it's possible my first sample (high concentration) may mostly bind up and I then have to wait for the dissociation (which is slower than association) for the subsequent samples to equilibrate?

    Question 2: Sapidyne recommends a large volume serial dilution strategy in which I serial dilute convenient small volumes, again in receptor, with much higher ligand, then when the serial dilution is done dilute all the samples with receptor to the final concentration and volume. Again, I'm diluting solutions that could easily be mostly bound so I have a longer wait for equilibrium, right?

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